Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdlim1O70400 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pdlim1O70400 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim1O70400 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.43□□□□□ -0.26
Pdlim1O70400 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.43□□□□□ -0.26
Pdlim1O70400 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim1O70400 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim1O70400 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12403-201ENSMUST00000121384 959 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.42□□□□□ -0.26
Pdlim1O70400 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim1O70400 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim1O70400 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.41□□□□□ -0.26
Pdlim1O70400 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pdlim1O70400 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdlim1O70400 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.41□□□□□ -0.26
Pdlim1O70400 Gm42550-201ENSMUST00000201553 960 ntBASIC13.41□□□□□ -0.26
Pdlim1O70400 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.41□□□□□ -0.26
Pdlim1O70400 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pdlim1O70400 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pdlim1O70400 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim1O70400 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms