Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Gm14928-201ENSMUST00000120198 477 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Gm12490-201ENSMUST00000120255 560 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.63□□□□□ -0.39
BckdkO55028 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.63□□□□□ -0.39
BckdkO55028 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
BckdkO55028 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.63□□□□□ -0.39
BckdkO55028 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BckdkO55028 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.63□□□□□ -0.39
BckdkO55028 Gm5425-201ENSMUST00000214125 459 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.63□□□□□ -0.39
BckdkO55028 Gm19220-201ENSMUST00000222682 803 ntBASIC12.63□□□□□ -0.39
BckdkO55028 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BckdkO55028 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
BckdkO55028 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BckdkO55028 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BckdkO55028 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BckdkO55028 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.62□□□□□ -0.39
BckdkO55028 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BckdkO55028 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.62□□□□□ -0.39
BckdkO55028 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.62□□□□□ -0.39
BckdkO55028 Gm4804-201ENSMUST00000182234 999 ntBASIC12.62□□□□□ -0.39
BckdkO55028 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.62□□□□□ -0.39
BckdkO55028 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.62□□□□□ -0.39
BckdkO55028 Gm37917-201ENSMUST00000194711 392 ntBASIC12.62□□□□□ -0.39
BckdkO55028 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
BckdkO55028 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.62□□□□□ -0.39
BckdkO55028 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.62□□□□□ -0.39
BckdkO55028 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.62□□□□□ -0.39
BckdkO55028 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.62□□□□□ -0.39
BckdkO55028 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
BckdkO55028 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BckdkO55028 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BckdkO55028 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
BckdkO55028 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
BckdkO55028 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BckdkO55028 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BckdkO55028 Gm6745-201ENSMUST00000199216 526 ntBASIC12.61□□□□□ -0.39
BckdkO55028 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms