Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smarce1O54941 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.16■□□□□ 0.18
Smarce1O54941 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smarce1O54941 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.16■□□□□ 0.18
Smarce1O54941 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.16■□□□□ 0.18
Smarce1O54941 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smarce1O54941 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarce1O54941 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smarce1O54941 Mir449b-201ENSMUST00000104833 80 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarce1O54941 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarce1O54941 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.15■□□□□ 0.18
Smarce1O54941 Gm27533-201ENSMUST00000183800 152 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarce1O54941 Gm10766-202ENSMUST00000194123 606 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Gm5312-201ENSMUST00000203728 547 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Gm46209-201ENSMUST00000217912 553 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarce1O54941 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.15■□□□□ 0.18
Smarce1O54941 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarce1O54941 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smarce1O54941 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarce1O54941 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarce1O54941 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.14■□□□□ 0.17
Smarce1O54941 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Smarce1O54941 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.14■□□□□ 0.17
Smarce1O54941 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Gm14822-201ENSMUST00000122247 291 ntBASIC16.14■□□□□ 0.17
Smarce1O54941 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.14■□□□□ 0.17
Smarce1O54941 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarce1O54941 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.14■□□□□ 0.17
Smarce1O54941 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.14■□□□□ 0.17
Smarce1O54941 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.14■□□□□ 0.17
Smarce1O54941 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Smarce1O54941 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarce1O54941 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Smarce1O54941 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms