Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.28□□□□□ -0.28
Npc1O35604 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.28□□□□□ -0.28
Npc1O35604 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npc1O35604 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npc1O35604 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npc1O35604 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Npc1O35604 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npc1O35604 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npc1O35604 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Npc1O35604 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.27□□□□□ -0.28
Npc1O35604 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Npc1O35604 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Gm11524-201ENSMUST00000119349 807 ntBASIC13.27□□□□□ -0.29
Npc1O35604 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Gm23984-201ENSMUST00000157139 203 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Mir7654-201ENSMUST00000185082 70 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Gm19078-201ENSMUST00000206311 727 ntBASIC13.27□□□□□ -0.29
Npc1O35604 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.27□□□□□ -0.29
Npc1O35604 Mir497b-201ENSMUST00000093601 125 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.27□□□□□ -0.29
Npc1O35604 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.27□□□□□ -0.29
Npc1O35604 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Npc1O35604 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Npc1O35604 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npc1O35604 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Npc1O35604 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npc1O35604 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Npc1O35604 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.26□□□□□ -0.29
Npc1O35604 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.26□□□□□ -0.29
Npc1O35604 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.26□□□□□ -0.29
Npc1O35604 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Npc1O35604 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Gm5186-201ENSMUST00000218781 920 ntBASIC13.26□□□□□ -0.29
Npc1O35604 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.26□□□□□ -0.29
Npc1O35604 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.26□□□□□ -0.29
Npc1O35604 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Npc1O35604 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.26□□□□□ -0.29
Npc1O35604 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Npc1O35604 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npc1O35604 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Npc1O35604 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Npc1O35604 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.25□□□□□ -0.29
Npc1O35604 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.25□□□□□ -0.29
Npc1O35604 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.25□□□□□ -0.29
Npc1O35604 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.25□□□□□ -0.29
Npc1O35604 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.25□□□□□ -0.29
Npc1O35604 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npc1O35604 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Npc1O35604 Gm2445-201ENSMUST00000182798 989 ntBASIC13.25□□□□□ -0.29
Npc1O35604 Gm27701-201ENSMUST00000184498 110 ntBASIC13.25□□□□□ -0.29
Npc1O35604 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms