Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stx1aO35526 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stx1aO35526 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Stx1aO35526 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Stx1aO35526 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Gm25287-201ENSMUST00000103846 110 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Gm22918-201ENSMUST00000103855 110 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Gm27494-201ENSMUST00000184735 189 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Stx1aO35526 Gm16476-201ENSMUST00000221544 139 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.27■□□□□ 0.04
Stx1aO35526 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stx1aO35526 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.27■□□□□ 0.03
Stx1aO35526 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.27■□□□□ 0.03
Stx1aO35526 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stx1aO35526 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Stx1aO35526 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.26■□□□□ 0.03
Stx1aO35526 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Stx1aO35526 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Stx1aO35526 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stx1aO35526 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stx1aO35526 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Stx1aO35526 Gm12428-201ENSMUST00000119844 727 ntBASIC15.25■□□□□ 0.03
Stx1aO35526 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.25■□□□□ 0.03
Stx1aO35526 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.25■□□□□ 0.03
Stx1aO35526 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.25■□□□□ 0.03
Stx1aO35526 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Stx1aO35526 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Stx1aO35526 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stx1aO35526 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Stx1aO35526 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms