Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6bO35451 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6bO35451 Gm7730-201ENSMUST00000212486 454 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 Gm5425-201ENSMUST00000214125 459 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.84□□□□□ -0.51
Atf6bO35451 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atf6bO35451 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Atf6bO35451 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atf6bO35451 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.84□□□□□ -0.51
Atf6bO35451 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6bO35451 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atf6bO35451 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.84□□□□□ -0.51
Atf6bO35451 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Atf6bO35451 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Atf6bO35451 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Atf6bO35451 Gm5866-201ENSMUST00000177881 973 ntBASIC11.83□□□□□ -0.52
Atf6bO35451 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Atf6bO35451 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.83□□□□□ -0.52
Atf6bO35451 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.83□□□□□ -0.52
Atf6bO35451 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Atf6bO35451 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6bO35451 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.82□□□□□ -0.52
Atf6bO35451 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Atf6bO35451 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atf6bO35451 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6bO35451 Gm44855-201ENSMUST00000205725 362 ntBASIC11.82□□□□□ -0.52
Atf6bO35451 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.82□□□□□ -0.52
Atf6bO35451 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6bO35451 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms