Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.74□□□□□ -0.69
Efnb3O35393 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm27494-201ENSMUST00000184735 189 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.74□□□□□ -0.69
Efnb3O35393 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Efnb3O35393 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.74□□□□□ -0.69
Efnb3O35393 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Efnb3O35393 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.74□□□□□ -0.69
Efnb3O35393 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Efnb3O35393 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Efnb3O35393 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Gm13823-201ENSMUST00000119930 345 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.73□□□□□ -0.69
Efnb3O35393 Gm6736-201ENSMUST00000166583 948 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Gm18027-201ENSMUST00000218947 619 ntBASIC10.73□□□□□ -0.69
Efnb3O35393 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Efnb3O35393 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Efnb3O35393 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms