Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col15a1O35206 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col15a1O35206 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.21■□□□□ 0.35
Col15a1O35206 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Col15a1O35206 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col15a1O35206 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC17.2■□□□□ 0.34
Col15a1O35206 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.2■□□□□ 0.34
Col15a1O35206 Gm17208-201ENSMUST00000168388 535 ntBASIC17.2■□□□□ 0.34
Col15a1O35206 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.2■□□□□ 0.34
Col15a1O35206 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.2■□□□□ 0.34
Col15a1O35206 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col15a1O35206 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.2■□□□□ 0.34
Col15a1O35206 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col15a1O35206 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col15a1O35206 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.19■□□□□ 0.34
Col15a1O35206 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Col15a1O35206 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.19■□□□□ 0.34
Col15a1O35206 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Gm45186-201ENSMUST00000206874 478 ntBASIC17.19■□□□□ 0.34
Col15a1O35206 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.19■□□□□ 0.34
Col15a1O35206 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col15a1O35206 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col15a1O35206 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.19■□□□□ 0.34
Col15a1O35206 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col15a1O35206 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Col15a1O35206 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col15a1O35206 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Gm14726-201ENSMUST00000120623 896 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Gm16505-201ENSMUST00000179981 232 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Gm3786-201ENSMUST00000202659 378 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col15a1O35206 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Col15a1O35206 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col15a1O35206 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.18■□□□□ 0.34
Col15a1O35206 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Col15a1O35206 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.18■□□□□ 0.34
Col15a1O35206 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.18■□□□□ 0.34
Col15a1O35206 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col15a1O35206 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Col15a1O35206 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.17■□□□□ 0.34
Col15a1O35206 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col15a1O35206 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col15a1O35206 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col15a1O35206 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col15a1O35206 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.17■□□□□ 0.34
Col15a1O35206 Mir3547-201ENSMUST00000175461 88 ntBASIC17.17■□□□□ 0.34
Col15a1O35206 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col15a1O35206 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms