Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cx3cl1O35188 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.79□□□□□ -0.36
Cx3cl1O35188 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.78□□□□□ -0.36
Cx3cl1O35188 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gm7063-201ENSMUST00000186840 981 ntBASIC12.78□□□□□ -0.36
Cx3cl1O35188 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.78□□□□□ -0.36
Cx3cl1O35188 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cx3cl1O35188 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.78□□□□□ -0.36
Cx3cl1O35188 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cx3cl1O35188 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cx3cl1O35188 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cx3cl1O35188 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms