Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Alx4O35137 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Alx4O35137 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Alx4O35137 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Alx4O35137 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Alx4O35137 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.12□□□□□ -0.47
Alx4O35137 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.12□□□□□ -0.47
Alx4O35137 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.12□□□□□ -0.47
Alx4O35137 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
Alx4O35137 Gm27494-201ENSMUST00000184735 189 ntBASIC12.12□□□□□ -0.47
Alx4O35137 Gm29541-201ENSMUST00000191351 678 ntBASIC12.12□□□□□ -0.47
Alx4O35137 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.12□□□□□ -0.47
Alx4O35137 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.12□□□□□ -0.47
Alx4O35137 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.12□□□□□ -0.47
Alx4O35137 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Alx4O35137 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Alx4O35137 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Alx4O35137 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Alx4O35137 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.12□□□□□ -0.47
Alx4O35137 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Alx4O35137 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Alx4O35137 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Alx4O35137 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Alx4O35137 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.11□□□□□ -0.47
Alx4O35137 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Alx4O35137 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Gm15460-201ENSMUST00000118147 391 ntBASIC12.11□□□□□ -0.47
Alx4O35137 Mir1895-201ENSMUST00000122615 79 ntBASIC12.11□□□□□ -0.47
Alx4O35137 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Alx4O35137 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Gm4804-201ENSMUST00000182234 999 ntBASIC12.11□□□□□ -0.47
Alx4O35137 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.11□□□□□ -0.47
Alx4O35137 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Alx4O35137 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Alx4O35137 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Alx4O35137 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms