Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm13570-201ENSMUST00000140763 309 ntBASIC20.5■□□□□ 0.87
Polr1aO35134 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm5950-201ENSMUST00000213337 772 ntBASIC20.5■□□□□ 0.87
Polr1aO35134 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.5■□□□□ 0.87
Polr1aO35134 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.49■□□□□ 0.87
Polr1aO35134 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC20.49■□□□□ 0.87
Polr1aO35134 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC20.49■□□□□ 0.87
Polr1aO35134 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Gm38092-201ENSMUST00000195600 653 ntBASIC20.49■□□□□ 0.87
Polr1aO35134 Gm43138-201ENSMUST00000199123 708 ntBASIC20.49■□□□□ 0.87
Polr1aO35134 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Gm5904-201ENSMUST00000210286 865 ntBASIC20.49■□□□□ 0.87
Polr1aO35134 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Polr1aO35134 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Polr1aO35134 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr1aO35134 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Gm15547-201ENSMUST00000122152 333 ntBASIC20.48■□□□□ 0.87
Polr1aO35134 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Polr1aO35134 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr1aO35134 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Polr1aO35134 Gm5466-201ENSMUST00000119395 1890 ntBASIC20.48■□□□□ 0.87
Polr1aO35134 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC20.47■□□□□ 0.87
Polr1aO35134 Mir5132-201ENSMUST00000175166 71 ntBASIC20.47■□□□□ 0.87
Polr1aO35134 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Gm22058-201ENSMUST00000083393 310 ntBASIC20.47■□□□□ 0.87
Polr1aO35134 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Daam2-202ENSMUST00000224595 1926 ntBASIC20.47■□□□□ 0.87
Polr1aO35134 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Polr1aO35134 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr1aO35134 Gm43697-201ENSMUST00000199637 2581 ntBASIC20.47■□□□□ 0.87
Polr1aO35134 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Gm45133-201ENSMUST00000207548 2773 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 Gm43289-201ENSMUST00000200537 1475 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC20.46■□□□□ 0.87
Polr1aO35134 Mmp14-206ENSMUST00000225641 3238 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC20.46■□□□□ 0.87
Polr1aO35134 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 Gm4760-201ENSMUST00000119663 1030 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 Gm3096-201ENSMUST00000185770 364 ntBASIC20.46■□□□□ 0.87
Polr1aO35134 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr1aO35134 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms