Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm9727-201ENSMUST00000161387 555 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm37714-201ENSMUST00000194742 342 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.38□□□□□ -0.43
Shisa8J3QNX5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.38□□□□□ -0.43
Shisa8J3QNX5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Gm27631-201ENSMUST00000184163 466 ntBASIC12.37□□□□□ -0.43
Shisa8J3QNX5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Mir125a-201ENSMUST00000083545 68 ntBASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shisa8J3QNX5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms