Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm17535J3KMR8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm17535J3KMR8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm17535J3KMR8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm17535J3KMR8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Gm14350-201ENSMUST00000116642 640 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Gm6447-201ENSMUST00000118905 835 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Gm22331-201ENSMUST00000158066 136 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17535J3KMR8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm24644-201ENSMUST00000157114 139 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm29649-201ENSMUST00000185649 419 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm18062-201ENSMUST00000208020 547 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm18055-201ENSMUST00000208254 547 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17535J3KMR8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.37□□□□□ -0.11
Gm17535J3KMR8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gm17535J3KMR8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms