Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Gm10312-201ENSMUST00000078515 489 ntBASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a3E9PWQ3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Gm45481-201ENSMUST00000209717 877 ntBASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a3E9PWQ3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a3E9PWQ3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm18059-201ENSMUST00000208073 580 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm10774-201ENSMUST00000188689 204 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm42657-201ENSMUST00000201746 211 ntBASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a3E9PWQ3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a3E9PWQ3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms