Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.53□□□□□ -0.56
BC035044E0CXF8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.53□□□□□ -0.56
BC035044E0CXF8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
BC035044E0CXF8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
BC035044E0CXF8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BC035044E0CXF8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm6912-201ENSMUST00000117218 544 ntBASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm15693-201ENSMUST00000120470 637 ntBASIC11.52□□□□□ -0.57
BC035044E0CXF8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm24158-201ENSMUST00000175263 71 ntBASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
BC035044E0CXF8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
BC035044E0CXF8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms