Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm13461-201ENSMUST00000120980 662 ntBASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm8546-201ENSMUST00000178288 1264 ntBASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm44262-201ENSMUST00000204969 372 ntBASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Gm43378-201ENSMUST00000199336 582 ntBASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hfm1D3Z4R1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm25043-201ENSMUST00000158604 212 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm26361-201ENSMUST00000158868 186 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm25700-201ENSMUST00000177693 110 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm3096-201ENSMUST00000185770 364 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm38297-201ENSMUST00000195122 1057 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm18916-201ENSMUST00000198264 1246 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Gm18556-201ENSMUST00000219748 1031 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hfm1D3Z4R1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Mir7032-201ENSMUST00000185154 79 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Gm8712-201ENSMUST00000221090 701 ntBASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Hfm1D3Z4R1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms