Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm8515-201ENSMUST00000194852 576 ntBASIC12.32□□□□□ -0.44
Gm3543D3Z235 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm5186-201ENSMUST00000218781 920 ntBASIC12.32□□□□□ -0.44
Gm3543D3Z235 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm15823-201ENSMUST00000064305 670 ntBASIC12.32□□□□□ -0.44
Gm3543D3Z235 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.32□□□□□ -0.44
Gm3543D3Z235 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm3543D3Z235 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm37917-201ENSMUST00000194711 392 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm18018-201ENSMUST00000198273 408 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.31□□□□□ -0.44
Gm3543D3Z235 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3543D3Z235 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.3□□□□□ -0.44
Gm3543D3Z235 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Gm9794-201ENSMUST00000202370 423 ntBASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm3543D3Z235 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms