Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shank1D3YZU1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm38158-201ENSMUST00000194617 339 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm42550-201ENSMUST00000201553 960 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm13369-201ENSMUST00000119442 987 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm37497-201ENSMUST00000195830 798 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.16□□□□□ -0.46
Shank1D3YZU1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Gm2383-201ENSMUST00000181461 807 ntBASIC12.15□□□□□ -0.46
Shank1D3YZU1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Gm10146-201ENSMUST00000072739 309 ntBASIC12.15□□□□□ -0.46
Shank1D3YZU1 Gm5161-201ENSMUST00000075243 853 ntBASIC12.15□□□□□ -0.46
Shank1D3YZU1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shank1D3YZU1 Gm13297-201ENSMUST00000120205 934 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.15□□□□□ -0.47
Shank1D3YZU1 Gm17376-201ENSMUST00000166016 84 ntBASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms