Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syce3B5KM66 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Syce3B5KM66 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syce3B5KM66 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Gm37714-201ENSMUST00000194742 342 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.53■□□□□ 0.08
Syce3B5KM66 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Mir497b-201ENSMUST00000093601 125 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Syce3B5KM66 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.53■□□□□ 0.08
Syce3B5KM66 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syce3B5KM66 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.52■□□□□ 0.08
Syce3B5KM66 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.52■□□□□ 0.08
Syce3B5KM66 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syce3B5KM66 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Syce3B5KM66 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Syce3B5KM66 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syce3B5KM66 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Syce3B5KM66 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Syce3B5KM66 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Syce3B5KM66 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.51■□□□□ 0.07
Syce3B5KM66 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Gm15427-201ENSMUST00000117288 531 ntBASIC15.51■□□□□ 0.07
Syce3B5KM66 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.51■□□□□ 0.07
Syce3B5KM66 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.51■□□□□ 0.07
Syce3B5KM66 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Syce3B5KM66 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.51■□□□□ 0.07
Syce3B5KM66 AA619741-201ENSMUST00000195095 646 ntBASIC15.51■□□□□ 0.07
Syce3B5KM66 Gm6443-201ENSMUST00000203599 874 ntBASIC15.51■□□□□ 0.07
Syce3B5KM66 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syce3B5KM66 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms