Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm11531-201ENSMUST00000117614 555 ntBASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm14034-201ENSMUST00000120147 551 ntBASIC10.89□□□□□ -0.67
Chd6A3KFM7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm4768-201ENSMUST00000206199 686 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm11979-201ENSMUST00000119629 743 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm11637-201ENSMUST00000120601 592 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm45120-201ENSMUST00000208880 408 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Gm16372-201ENSMUST00000073088 450 ntBASIC10.88□□□□□ -0.67
Chd6A3KFM7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd6A3KFM7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm14109-201ENSMUST00000118814 309 ntBASIC10.87□□□□□ -0.67
Chd6A3KFM7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.87□□□□□ -0.67
Chd6A3KFM7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm15515-201ENSMUST00000117827 822 ntBASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm22138-201ENSMUST00000158748 128 ntBASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chd6A3KFM7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms