Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.46□□□□□ -0.58
Col6a4A2AX52 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Gm38158-201ENSMUST00000194617 339 ntBASIC11.46□□□□□ -0.58
Col6a4A2AX52 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a4A2AX52 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gm38223-201ENSMUST00000194484 695 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gm5363-201ENSMUST00000211927 938 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gm6082-201ENSMUST00000215204 454 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gm5161-201ENSMUST00000075243 853 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 Mir433-201ENSMUST00000093564 124 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.45□□□□□ -0.58
Col6a4A2AX52 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a4A2AX52 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm29396-201ENSMUST00000185659 716 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm37497-201ENSMUST00000195830 798 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm27341-201ENSMUST00000183570 106 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm7046-201ENSMUST00000221351 977 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm10268-201ENSMUST00000085340 555 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.44□□□□□ -0.58
Col6a4A2AX52 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a4A2AX52 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms