Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cfap99A0A140LIX9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cfap99A0A140LIX9 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm13226-201ENSMUST00000117838 404 ntBASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm15429-201ENSMUST00000151268 798 ntBASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cfap99A0A140LIX9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm11814-201ENSMUST00000119515 929 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm45784-201ENSMUST00000188360 142 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm2495-201ENSMUST00000191160 466 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm43094-201ENSMUST00000196549 921 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm19078-201ENSMUST00000206311 727 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Gm18027-201ENSMUST00000218947 619 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cfap99A0A140LIX9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cfap99A0A140LIX9 Gm11524-201ENSMUST00000119349 807 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms