Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Mir6990-201ENSMUST00000183724 91 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gm27741-201ENSMUST00000185060 237 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gm12428-201ENSMUST00000119844 727 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gm43125-201ENSMUST00000201724 730 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Syt7-205ENSMUST00000224135 1557 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.28□□□□□ -0.6
Trbv29A0A0G2LB96 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trbv29A0A0G2LB96 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.27□□□□□ -0.6
Trbv29A0A0G2LB96 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trbv29A0A0G2LB96 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trbv29A0A0G2LB96 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trbv29A0A0G2LB96 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Gm15460-201ENSMUST00000118147 391 ntBASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Gm21470-201ENSMUST00000187680 696 ntBASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trbv29A0A0G2LB96 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms