Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clcn2Q9R0A1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clcn2Q9R0A1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gm46209-201ENSMUST00000217912 553 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Clcn2Q9R0A1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms