Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm23984-201ENSMUST00000157139 203 ntBASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm5354-201ENSMUST00000182417 973 ntBASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm6745-201ENSMUST00000199216 526 ntBASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcf1Q9QZM3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Gm15240-201ENSMUST00000118156 720 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Gm5279-201ENSMUST00000199575 745 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Gm17795-201ENSMUST00000214505 757 ntBASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Clcf1Q9QZM3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms