Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm24513-201ENSMUST00000174964 138 ntBASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm37714-201ENSMUST00000194742 342 ntBASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gm5566-201ENSMUST00000116118 459 ntBASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gm43575-201ENSMUST00000196420 516 ntBASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gm6916-202ENSMUST00000205523 195 ntBASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chaf1aQ9QWF0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22065-201ENSMUST00000103753 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22066-201ENSMUST00000103761 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24932-201ENSMUST00000103763 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24115-201ENSMUST00000103799 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22190-201ENSMUST00000103827 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22191-201ENSMUST00000103831 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24721-201ENSMUST00000103849 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm28018-201ENSMUST00000103869 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm26399-201ENSMUST00000103937 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm12428-201ENSMUST00000119844 727 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24158-201ENSMUST00000175263 71 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25349-201ENSMUST00000177728 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm23616-201ENSMUST00000177797 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25871-201ENSMUST00000177816 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24752-201ENSMUST00000178240 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm24496-201ENSMUST00000178287 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25649-201ENSMUST00000178476 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm25548-201ENSMUST00000178681 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm23147-201ENSMUST00000178841 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm26095-201ENSMUST00000179270 110 ntBASIC15.24■□□□□ 0.03
Chaf1aQ9QWF0 Gm22171-201ENSMUST00000179283 110 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms