Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm6091-201ENSMUST00000098307 165 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Ube3bQ9ES34 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Gm8213-201ENSMUST00000118191 441 ntBASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ube3bQ9ES34 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Gm19087-201ENSMUST00000191430 946 ntBASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ube3bQ9ES34 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms