Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm19163-201ENSMUST00000223313 780 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-4Q9EQM3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-4Q9EQM3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-4Q9EQM3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-4Q9EQM3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-4Q9EQM3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm14028-201ENSMUST00000117434 479 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-4Q9EQM3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.88□□□□□ -0.19
Nkx2-4Q9EQM3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms