Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.87■□□□□ 0.45
U2af1Q9D883 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.87■□□□□ 0.45
U2af1Q9D883 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.87■□□□□ 0.45
U2af1Q9D883 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
U2af1Q9D883 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
U2af1Q9D883 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.87■□□□□ 0.45
U2af1Q9D883 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
U2af1Q9D883 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.86■□□□□ 0.45
U2af1Q9D883 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.86■□□□□ 0.45
U2af1Q9D883 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.86■□□□□ 0.45
U2af1Q9D883 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
U2af1Q9D883 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.85■□□□□ 0.45
U2af1Q9D883 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.85■□□□□ 0.45
U2af1Q9D883 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.85■□□□□ 0.45
U2af1Q9D883 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.85■□□□□ 0.45
U2af1Q9D883 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
U2af1Q9D883 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2af1Q9D883 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
U2af1Q9D883 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.84■□□□□ 0.45
U2af1Q9D883 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
U2af1Q9D883 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
U2af1Q9D883 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
U2af1Q9D883 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Gm38144-201ENSMUST00000192790 465 ntBASIC17.84■□□□□ 0.45
U2af1Q9D883 Gm7287-201ENSMUST00000205267 602 ntBASIC17.84■□□□□ 0.45
U2af1Q9D883 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.84■□□□□ 0.45
U2af1Q9D883 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2af1Q9D883 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
U2af1Q9D883 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms