Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gm25287-201ENSMUST00000103846 110 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gm22918-201ENSMUST00000103855 110 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gm12428-201ENSMUST00000119844 727 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gm16476-201ENSMUST00000221544 139 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp5Q9D7S9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp5Q9D7S9 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.02■□□□□ 0.31
Chmp5Q9D7S9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp5Q9D7S9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Gm25911-201ENSMUST00000157621 56 ntBASIC17■□□□□ 0.31
Chmp5Q9D7S9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Gm18934-201ENSMUST00000216671 1044 ntBASIC17■□□□□ 0.31
Chmp5Q9D7S9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chmp5Q9D7S9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Gm27741-201ENSMUST00000185060 237 ntBASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp5Q9D7S9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms