Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm5187-201ENSMUST00000117317 991 ntBASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.18■□□□□ 0.18
Stag1Q9D3E6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.18■□□□□ 0.18
Stag1Q9D3E6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Stag1Q9D3E6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.17■□□□□ 0.18
Stag1Q9D3E6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Stag1Q9D3E6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm12203-201ENSMUST00000118235 598 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm12209-201ENSMUST00000120089 596 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm27514-201ENSMUST00000183692 110 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm5370-201ENSMUST00000187187 574 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.16■□□□□ 0.18
Stag1Q9D3E6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stag1Q9D3E6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms