Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk1aQ9D132 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk1aQ9D132 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm18889-201ENSMUST00000174284 929 ntBASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm27494-201ENSMUST00000184735 189 ntBASIC12.89□□□□□ -0.35
Upk1aQ9D132 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk1aQ9D132 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm8000-201ENSMUST00000188378 592 ntBASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.88□□□□□ -0.35
Upk1aQ9D132 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.88□□□□□ -0.35
Upk1aQ9D132 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.88□□□□□ -0.35
Upk1aQ9D132 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk1aQ9D132 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.87□□□□□ -0.35
Upk1aQ9D132 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.87□□□□□ -0.35
Upk1aQ9D132 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk1aQ9D132 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms