Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snf8Q9CZ28 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snf8Q9CZ28 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.02□□□□□ -0.16
Snf8Q9CZ28 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Gm29541-201ENSMUST00000191351 678 ntBASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.02□□□□□ -0.17
Snf8Q9CZ28 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snf8Q9CZ28 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Mir1895-201ENSMUST00000122615 79 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gm2213-201ENSMUST00000197485 688 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.01□□□□□ -0.17
Snf8Q9CZ28 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Gm43423-201ENSMUST00000198390 2094 ntBASIC14□□□□□ -0.17
Snf8Q9CZ28 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Snf8Q9CZ28 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snf8Q9CZ28 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms