Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm15467-201ENSMUST00000120582 445 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim13Q9CYB0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm12260-201ENSMUST00000122447 411 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm18737-201ENSMUST00000173594 937 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm8000-201ENSMUST00000188378 592 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim13Q9CYB0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim13Q9CYB0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms