Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm1401-201ENSMUST00000122048 772 ntBASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Rprl2-201ENSMUST00000157150 290 ntBASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Mir7221-201ENSMUST00000184009 72 ntBASIC13.52□□□□□ -0.25
Ssu72Q9CY97 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ssu72Q9CY97 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Gm16476-201ENSMUST00000221544 139 ntBASIC13.51□□□□□ -0.25
Ssu72Q9CY97 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Dupd1-202ENSMUST00000224735 548 ntBASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ssu72Q9CY97 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm12428-201ENSMUST00000119844 727 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm8927-201ENSMUST00000181978 981 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm3222-201ENSMUST00000071282 990 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssu72Q9CY97 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms