Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm22189-201ENSMUST00000103822 86 ntBASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm5279-201ENSMUST00000199575 745 ntBASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm44855-201ENSMUST00000205725 362 ntBASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa3Q9CQ71 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rpa3Q9CQ71 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rpa3Q9CQ71 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gm15770-201ENSMUST00000117498 584 ntBASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gm27437-201ENSMUST00000183429 107 ntBASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa3Q9CQ71 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm42612-201ENSMUST00000197986 623 ntBASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Gm43170-201ENSMUST00000199827 612 ntBASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa3Q9CQ71 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms