Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim16Q99PP9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim16Q99PP9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.33□□□□□ -0.27
Trim16Q99PP9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim16Q99PP9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim16Q99PP9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Auts2-212ENSMUST00000178555 309 ntBASIC13.33□□□□□ -0.28
Trim16Q99PP9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.33□□□□□ -0.28
Trim16Q99PP9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim16Q99PP9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.33□□□□□ -0.28
Trim16Q99PP9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim16Q99PP9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.32□□□□□ -0.28
Trim16Q99PP9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim16Q99PP9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.31□□□□□ -0.28
Trim16Q99PP9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms