Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Mir686-201ENSMUST00000102174 109 ntBASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm14350-201ENSMUST00000116642 640 ntBASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm14723-201ENSMUST00000118686 215 ntBASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim34aQ99PP6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm38266-201ENSMUST00000194931 421 ntBASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm42627-201ENSMUST00000197347 224 ntBASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim34aQ99PP6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trim34aQ99PP6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Gm27501-201ENSMUST00000183599 107 ntBASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Gm3961-201ENSMUST00000204425 994 ntBASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim34aQ99PP6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms