Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd3Q99LE3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd3Q99LE3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.13□□□□□ -0.15
Lysmd3Q99LE3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm5035-201ENSMUST00000215581 927 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd3Q99LE3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm18187-201ENSMUST00000196476 984 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lysmd3Q99LE3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.1□□□□□ -0.15
Lysmd3Q99LE3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms