Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Usp11Q99K46 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp11Q99K46 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp11Q99K46 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp11Q99K46 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp11Q99K46 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp11Q99K46 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Usp11Q99K46 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gm44608-201ENSMUST00000206827 855 ntBASIC14.37□□□□□ -0.11
Usp11Q99K46 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.37□□□□□ -0.11
Usp11Q99K46 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.37□□□□□ -0.11
Usp11Q99K46 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp11Q99K46 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp11Q99K46 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm27989-201ENSMUST00000184721 107 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm6916-202ENSMUST00000205523 195 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 Gm9229-201ENSMUST00000222777 126 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.36□□□□□ -0.11
Usp11Q99K46 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Usp11Q99K46 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp11Q99K46 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp11Q99K46 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.35□□□□□ -0.11
Usp11Q99K46 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp11Q99K46 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp11Q99K46 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp11Q99K46 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.35□□□□□ -0.11
Usp11Q99K46 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp11Q99K46 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp11Q99K46 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms