Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.71□□□□□ -0.21
Cdk9Q99J95 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.71□□□□□ -0.21
Cdk9Q99J95 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.71□□□□□ -0.21
Cdk9Q99J95 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk9Q99J95 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm25911-201ENSMUST00000157621 56 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm17271-201ENSMUST00000165535 355 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm6736-201ENSMUST00000166583 948 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm24513-201ENSMUST00000174964 138 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm27702-201ENSMUST00000184512 56 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm44608-201ENSMUST00000206827 855 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.7□□□□□ -0.22
Cdk9Q99J95 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk9Q99J95 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.69□□□□□ -0.22
Cdk9Q99J95 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.69□□□□□ -0.22
Cdk9Q99J95 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.69□□□□□ -0.22
Cdk9Q99J95 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cdk9Q99J95 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk9Q99J95 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms