Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Clip1Q922J3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC21.17■□□□□ 0.98
Clip1Q922J3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clip1Q922J3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Clip1Q922J3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip1Q922J3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip1Q922J3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC21.16■□□□□ 0.98
Clip1Q922J3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm16479-201ENSMUST00000121706 932 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm2231-201ENSMUST00000125661 612 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm16379-201ENSMUST00000161469 348 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm8762-201ENSMUST00000193486 339 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC21.16■□□□□ 0.98
Clip1Q922J3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Gm42872-201ENSMUST00000200026 1967 ntBASIC21.16■□□□□ 0.98
Clip1Q922J3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip1Q922J3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC21.15■□□□□ 0.98
Clip1Q922J3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Gm11637-201ENSMUST00000120601 592 ntBASIC21.15■□□□□ 0.98
Clip1Q922J3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC21.15■□□□□ 0.98
Clip1Q922J3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC21.15■□□□□ 0.98
Clip1Q922J3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Clip1Q922J3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC21.15■□□□□ 0.98
Clip1Q922J3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip1Q922J3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Clip1Q922J3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Clip1Q922J3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC21.14■□□□□ 0.98
Clip1Q922J3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm11591-201ENSMUST00000120063 702 ntBASIC21.14■□□□□ 0.98
Clip1Q922J3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm29396-201ENSMUST00000185659 716 ntBASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm38241-201ENSMUST00000192641 898 ntBASIC21.14■□□□□ 0.98
Clip1Q922J3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC21.14■□□□□ 0.98
Clip1Q922J3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC21.14■□□□□ 0.97
Clip1Q922J3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clip1Q922J3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clip1Q922J3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Clip1Q922J3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Gm7899-201ENSMUST00000192935 1897 ntBASIC21.14■□□□□ 0.97
Clip1Q922J3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clip1Q922J3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC21.13■□□□□ 0.97
Clip1Q922J3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Gm13342-201ENSMUST00000121055 207 ntBASIC21.13■□□□□ 0.97
Clip1Q922J3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Clip1Q922J3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Clip1Q922J3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Clip1Q922J3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip1Q922J3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms