Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdha9Q91Y11 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha9Q91Y11 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha9Q91Y11 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha9Q91Y11 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms