Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb3Q91XZ7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm13464-201ENSMUST00000119418 935 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm13365-201ENSMUST00000121188 973 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Rprl2-201ENSMUST00000157150 290 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm43084-201ENSMUST00000200696 947 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm20553-201ENSMUST00000204205 844 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.68□□□□□ -0.22
Pcdhb3Q91XZ7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm11745-201ENSMUST00000121669 448 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb3Q91XZ7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms