Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb4Q91XZ6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb4Q91XZ6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Gm33320-201ENSMUST00000192232 530 ntBASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb4Q91XZ6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb4Q91XZ6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms