Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm13333-201ENSMUST00000119424 781 ntBASIC14.02□□□□□ -0.17
Usp3Q91W36 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.02□□□□□ -0.17
Usp3Q91W36 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Gm8463-201ENSMUST00000208573 613 ntBASIC14.02□□□□□ -0.17
Usp3Q91W36 Gm6983-201ENSMUST00000214912 628 ntBASIC14.02□□□□□ -0.17
Usp3Q91W36 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp3Q91W36 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.02□□□□□ -0.17
Usp3Q91W36 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp3Q91W36 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Usp3Q91W36 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm15371-201ENSMUST00000117057 784 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm15806-201ENSMUST00000120696 955 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm9002-201ENSMUST00000178437 499 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC14.01□□□□□ -0.17
Usp3Q91W36 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Usp3Q91W36 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.01□□□□□ -0.17
Usp3Q91W36 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp3Q91W36 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14□□□□□ -0.17
Usp3Q91W36 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp3Q91W36 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp3Q91W36 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp3Q91W36 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp3Q91W36 Gm11478-201ENSMUST00000117851 599 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm12537-201ENSMUST00000119266 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm12070-201ENSMUST00000119551 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm12671-201ENSMUST00000119978 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm13292-201ENSMUST00000120014 1000 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14□□□□□ -0.17
Usp3Q91W36 Gm12403-201ENSMUST00000121384 959 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm10359-201ENSMUST00000180167 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm12033-201ENSMUST00000180654 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm5559-201ENSMUST00000180755 1002 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Gm4335-201ENSMUST00000182581 1004 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14□□□□□ -0.17
Usp3Q91W36 Gm17870-201ENSMUST00000219489 1174 ntBASIC14□□□□□ -0.17
Usp3Q91W36 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp3Q91W36 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms