Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Gm16177-201ENSMUST00000120728 718 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Mir1938-201ENSMUST00000158746 100 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 Gm37424-201ENSMUST00000191727 561 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.48□□□□□ -0.09
TraipQ8VIG6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TraipQ8VIG6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TraipQ8VIG6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.47□□□□□ -0.09
TraipQ8VIG6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.47□□□□□ -0.09
TraipQ8VIG6 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.47□□□□□ -0.09
TraipQ8VIG6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.47□□□□□ -0.09
TraipQ8VIG6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.47□□□□□ -0.09
TraipQ8VIG6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TraipQ8VIG6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Gm4271-201ENSMUST00000174444 973 ntBASIC14.46□□□□□ -0.09
TraipQ8VIG6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Gm29705-201ENSMUST00000212598 474 ntBASIC14.46□□□□□ -0.09
TraipQ8VIG6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.46□□□□□ -0.09
TraipQ8VIG6 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.46□□□□□ -0.09
TraipQ8VIG6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TraipQ8VIG6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TraipQ8VIG6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.46□□□□□ -0.1
TraipQ8VIG6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms