Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vps4aQ8VEJ9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm23984-201ENSMUST00000157139 203 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 AA619741-201ENSMUST00000195095 646 ntBASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4aQ8VEJ9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm18766-201ENSMUST00000189811 808 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm18062-201ENSMUST00000208020 547 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm18055-201ENSMUST00000208254 547 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4aQ8VEJ9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms