Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx39aQ8VDW0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx39aQ8VDW0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gm14660-201ENSMUST00000119809 575 ntBASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gm24644-201ENSMUST00000157114 139 ntBASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Mir1938-201ENSMUST00000158746 100 ntBASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ddx39aQ8VDW0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gm22331-201ENSMUST00000158066 136 ntBASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gm29127-201ENSMUST00000188304 517 ntBASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gm26315-201ENSMUST00000083890 321 ntBASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx39aQ8VDW0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms