Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Gm5866-201ENSMUST00000177881 973 ntBASIC14.93□□□□□ -0.02
Rpap2Q8VC34 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Rpap2Q8VC34 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Matn2-206ENSMUST00000228570 2798 ntBASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm12859-201ENSMUST00000117834 427 ntBASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rpap2Q8VC34 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.91□□□□□ -0.02
Rpap2Q8VC34 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms